{ "_id": "6a1059e8acfb0bcc41ca3866", "Package": "hdme", "Type": "Package", "Title": "High-Dimensional Regression with Measurement Error", "Version": "0.6.0", "Encoding": "UTF-8", "Authors@R": "c(person(\"Oystein\", \"Sorensen\", \nemail = \"oystein.sorensen.1985@gmail.com\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-0724-3542\")))", "Maintainer": "Oystein Sorensen ", "Description": "Penalized regression for generalized linear models for\nmeasurement error problems (aka. errors-in-variables). The\npackage contains a version of the lasso (L1-penalization) which\ncorrects for measurement error (Sorensen et al. (2015)\n). It also contains an implementation\nof the Generalized Matrix Uncertainty Selector, which is a\nversion the (Generalized) Dantzig Selector for the case of\nmeasurement error (Sorensen et al. (2018)\n).", "License": "GPL-3", "RoxygenNote": "7.2.3", "URL": "https://github.com/osorensen/hdme", "RdMacros": "Rdpack", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libglpk-dev", "Repository": "https://osorensen.r-universe.dev", "Date/Publication": "2023-05-16 18:51:20 UTC", "RemoteUrl": "https://github.com/osorensen/hdme", "RemoteRef": "HEAD", "RemoteSha": "610d1c9c14fd9669d055d702d15288afdd4325ce", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-05-09 06:12:52 UTC", "User": "root" }, "Author": "Oystein Sorensen [aut, cre] (ORCID:\n)", "MD5sum": "5d0ed678420431b5d56ee28d96b23e81", "_user": "osorensen", "_type": "src", "_file": "hdme_0.6.0.tar.gz", "_fileid": "0f8d0127a80e536e4ba70f0019abdc3f7daf8fc79f08c8fe311736eabeff8561", "_filesize": 815682, "_sha256": "0f8d0127a80e536e4ba70f0019abdc3f7daf8fc79f08c8fe311736eabeff8561", "_created": "2026-05-09T06:12:52.000Z", "_published": "2026-05-22T13:28:08.272Z", "_distro": "noble", "_jobs": [ { "job": 77389147513, "time": 160, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "6893507285" }, { "job": 77389147543, "time": 177, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6893509965" }, { "job": 77389147976, "time": 153, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "6893506489" }, { "job": 77389147743, "time": 172, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6893508765" }, { "job": 77389148094, "time": 224, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "6893510121" }, { "job": 77389147680, "time": 252, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "6893516072" }, { "job": 77389147736, "time": 205, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "6893507581" }, { "job": 77389147556, "time": 459, "config": "macos-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6893534620" }, { "job": 77389146710, "time": 228, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6893489897" }, { "job": 77389146804, "time": 112, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7161662271" }, { "job": 77389147482, "time": 195, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "6893511240" }, { "job": 77389147539, "time": 131, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "6893503860" }, { "job": 77389147588, "time": 149, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "6893506105" } ], "_buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/osorensen/hdme", "_commit": { "id": "610d1c9c14fd9669d055d702d15288afdd4325ce", "author": "Øystein Sørensen ", "committer": "Øystein Sørensen ", "message": "Typo fix\n", "time": 1684263080 }, "_maintainer": { "name": "Oystein Sorensen", "email": "oystein.sorensen.1985@gmail.com", "login": "oso-nextbridge", "uuid": 36225978, "orcid": "0000-0003-0724-3542" }, "_registered": true, "_dependencies": [ { "package": "Rcpp", "role": "LinkingTo" }, { "package": "RcppArmadillo", "role": "LinkingTo" }, { "package": "glmnet", "version": ">= 3.0.0", "role": "Imports" }, { "package": "ggplot2", "version": ">= 2.2.1", "role": "Imports" }, { "package": "Rdpack", "role": "Imports" }, { "package": "Rcpp", "version": ">= 0.12.15", "role": "Imports" }, { "package": "Rglpk", "version": ">= 0.6-1", "role": "Imports" }, { "package": "rlang", "version": ">= 1.0", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "role": "Suggests" }, { "package": "dplyr", "role": "Suggests" }, { "package": "tidyr", "role": "Suggests" }, { "package": "covr", "role": "Suggests" } ], "_owner": "osorensen", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 9, "_contributors": [ { "user": "osorensen", "count": 147, "uuid": 21175639 } ], "_userbio": { "uuid": 21175639, "type": "user", "name": "Øystein Sørensen", "description": "Professor of Biostatistics, University of Oslo." }, "_downloads": { "count": 250, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/hdme" }, "_devurl": "https://github.com/osorensen/hdme", "_searchresults": 30, "_topics": [ "cpp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/hdme.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/osorensen/hdme", "_realowner": "osorensen", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2018-03-09" }, { "version": "0.1.1", "date": "2018-03-30" }, { "version": "0.2.0", "date": "2018-05-19" }, { "version": "0.2.1", "date": "2018-10-15" }, { "version": "0.2.2", "date": "2019-03-08" }, { "version": "0.2.3", "date": "2019-04-12" }, { "version": "0.3.1", "date": "2019-05-20" }, { "version": "0.3.2", "date": "2019-11-11" }, { "version": "0.3.3", "date": "2020-05-18" }, { "version": "0.3.4", "date": "2021-09-02" }, { "version": "0.4.0", "date": "2022-07-03" }, { "version": "0.5.0", "date": "2022-07-20" }, { "version": "0.5.1", "date": "2023-02-28" }, { "version": "0.6.0", "date": "2023-05-16" } ], "_exports": [ "corrected_lasso", "cv_corrected_lasso", "cv_gds", "gds", "gmu_lasso", "gmus", "mus" ], "_help": [ { "page": "coef.corrected_lasso", "title": "Extract Coefficients of a Corrected Lasso object", "topics": [ "coef.corrected_lasso" ] }, { "page": "coef.gds", "title": "Extract Coefficients of a Generalized Dantzig Selector Object", "topics": [ "coef.gds" ] }, { "page": "coef.gmu_lasso", "title": "Extract Coefficients of a GMU Lasso object", "topics": [ "coef.gmu_lasso" ] }, { "page": "coef.gmus", "title": "Extract Coefficients of a GMUS object", "topics": [ "coef.gmus" ] }, { "page": "corrected_lasso", "title": "Corrected Lasso", "topics": [ "corrected_lasso" ] }, { "page": "cv_corrected_lasso", "title": "Cross-validated Corrected lasso", "topics": [ "cv_corrected_lasso" ] }, { "page": "cv_gds", "title": "Cross-Validated Generalized Dantzig Selector", "topics": [ "cv_gds" ] }, { "page": "gds", "title": "Generalized Dantzig Selector", "topics": [ "gds" ] }, { "page": "gmu_lasso", "title": "Generalized Matrix Uncertainty Lasso", "topics": [ "gmu_lasso" ] }, { "page": "gmus", "title": "Generalized Matrix Uncertainty Selector", "topics": [ "gmus" ] }, { "page": "mus", "title": "Matrix Uncertainty Selector", "topics": [ "mus" ] }, { "page": "plot.corrected_lasso", "title": "plot.corrected_lasso", "topics": [ "plot.corrected_lasso" ] }, { "page": "plot.cv_corrected_lasso", "title": "plot.cv_corrected_lasso", "topics": [ "plot.cv_corrected_lasso" ] }, { "page": "plot.cv_gds", "title": "plot.cv_gds", "topics": [ "plot.cv_gds" ] }, { "page": "plot.gds", "title": "Plot the estimates returned by gds", "topics": [ "plot.gds" ] }, { "page": "plot.gmu_lasso", "title": "Plot the estimates returned by gmu_lasso", "topics": [ "plot.gmu_lasso" ] }, { "page": "plot.gmus", "title": "Plot the estimates returned by gmus and mus", "topics": [ "plot.gmus" ] }, { "page": "print.corrected_lasso", "title": "Print a Corrected Lasso object", "topics": [ "print.corrected_lasso" ] }, { "page": "print.cv_corrected_lasso", "title": "Print a Cross-Validated Corrected Lasso object", "topics": [ "print.cv_corrected_lasso" ] }, { "page": "print.cv_gds", "title": "Print a Cross-Validated GDS Object", "topics": [ "print.cv_gds" ] }, { "page": "print.gds", "title": "Print a Generalized Dantzig Selector Object", "topics": [ "print.gds" ] }, { "page": "print.gmu_lasso", "title": "Print a GMU Lasso object", "topics": [ "print.gmu_lasso" ] }, { "page": "print.gmus", "title": "Print a GMUS object", "topics": [ "print.gmus" ] } ], "_readme": "https://github.com/osorensen/hdme/raw/HEAD/README.md", "_rundeps": [ "cli", "codetools", "cpp11", "farver", "foreach", "ggplot2", "glmnet", "glue", "gtable", "isoband", "iterators", "labeling", "lattice", "lifecycle", "Matrix", "R6", "rbibutils", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppEigen", "Rdpack", "Rglpk", "rlang", "S7", "scales", "shape", "slam", "survival", "vctrs", "viridisLite", "withr" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_vignettes": [ { "source": "hdme.Rmd", "filename": "hdme.html", "title": "The hdme package: regression methods for high-dimensional data with measurement error", "author": "Oystein Sorensen", "engine": "knitr::rmarkdown", "headings": [ "Measurement Error in Regression", "Classical Measurement Error Problems", "Measurement Error in High-Dimensional Regression Problems", "The lasso", "The Dantzig Selector", "Generalized Dantzig Selector", "Corrected Lasso", "Corrected Lasso for Linear Regression", "Linear Regression", "Corrected Lasso for Generalized Linear Models", "Logistic Regression", "Poison Regression", "Model Tuning", "Matrix Uncertainty Selector", "Generalized Matrix Uncertainty Selector", "Poisson Regression", "Generalized Matrix Uncertainty Lasso", "References" ], "created": "2019-04-12 08:39:41", "modified": "2023-05-16 18:51:20", "commits": 10 } ], "_score": 5.1303337684950066, "_indexed": true, "_nocasepkg": "hdme", "_universes": [ "osorensen", "oso-nextbridge" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.6.0", "date": "2026-05-09T06:15:11.000Z", "distro": "noble", "arch": "aarch64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "687cc2142ef93dcbb9067aaed69c44442f92ae1943b632d0db2d9e8aa36d4953", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.7.0", "os": "linux", "version": "0.6.0", "date": "2026-05-09T06:15:24.000Z", "distro": "noble", "arch": "x86_64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "03dcac1b6c9403292d9291d2be900b663030437e72ea4f1d93007ea219e16147", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.6.0", "os": "linux", "version": "0.6.0", "date": "2026-05-09T06:15:06.000Z", "distro": "noble", "arch": "aarch64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "0c7026ba73c5d104c9c386ed882430ebd8edc5ab6b88a1399a03b44d43d471ce", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.6.0", "os": "linux", "version": "0.6.0", "date": "2026-05-09T06:15:28.000Z", "distro": "noble", "arch": "x86_64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "67f7fd9993aaceae544cc573721a91c471a2079873274e888f04308695ff0a5b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.5.3", "os": "mac", "version": "0.6.0", "date": "2026-05-09T06:15:29.000Z", "arch": "aarch64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "dbb402de241e9387deeda46672c4208ac2ecee7edfbddb9caf9b56c2e0699c5e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.5.3", "os": "mac", "version": "0.6.0", "date": "2026-05-09T06:16:08.000Z", "arch": "x86_64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "bf214061f8d6ea97ebdda7bf74e32f51019867bacc0a1e664e730f9717b777c6", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.6.0", "os": "mac", "version": "0.6.0", "date": "2026-05-09T06:15:00.000Z", "arch": "aarch64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "38d18eb9d032be075065ab7251a3625df75d8eec3dbb9048661aecdbf2b8b0b7", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.6.0", "os": "mac", "version": "0.6.0", "date": "2026-05-09T06:17:26.000Z", "arch": "x86_64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "3d660ba54fdac2f3e617acf349917fe76e330c73a9c55b56b095a88b2d7bfd1c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.7.0", "os": "win", "version": "0.6.0", "date": "2026-05-09T06:14:35.000Z", "arch": "x86_64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "481fd27089ec0c9bf2f0eb5185e8c66a12cbea9400866edf8865b217de2ef483", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.5.3", "os": "win", "version": "0.6.0", "date": "2026-05-09T06:14:10.000Z", "arch": "x86_64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "d76af52b88046a819f03aecd15e4a76b8a7fe47fa2785b0ae56102a4966c99cb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.6.0", "os": "win", "version": "0.6.0", "date": "2026-05-09T06:14:21.000Z", "arch": "x86_64", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "73d69d10134622378a552d204ba00e21f0ede92910c3a90a083cf6f9a2b1058f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" }, { "r": "4.6.0", "os": "wasm", "version": "0.6.0", "date": "2026-05-22T13:27:41.000Z", "arch": "emscripten", "commit": "610d1c9c14fd9669d055d702d15288afdd4325ce", "fileid": "dba5729faa77ff3ce1c46249db5561ed89515905716527a6e9c799dce8efad46", "status": "success", "buildurl": "https://github.com/r-universe/osorensen/actions/runs/25593741766" } ] }